BioMake: a GNU make-compatible utility for declarative workflow management
نویسندگان
چکیده
منابع مشابه
From Paper Based Clinical Practice Guidelines to Declarative Workflow Management
We present a field study of oncology workflow, involving doctors, nurses and pharmacists at Danish hospitals and discuss the obstacles, enablers and challenges for the use of computer based clinical practice guidelines. Related to the CIGDec approach of Pesic and van der Aalst we then describe how a sub workflow can be described in a declarative workflow management system: the Resultmaker Onlin...
متن کاملMulti-objective and Scalable Heuristic Algorithm for Workflow Task Scheduling in Utility Grids
To use services transparently in a distributed environment, the Utility Grids develop a cyber-infrastructure. The parameters of the Quality of Service such as the allocation-cost and makespan have to be dealt with in order to schedule workflow application tasks in the Utility Grids. Optimization of both target parameters above is a challenge in a distributed environment and may conflict one an...
متن کاملDeclare: A Tool Suite for Declarative Workflow Modeling and Enactment
Declare adheres to the declarative workflow modeling paradigm, where, instead of modeling allowed behavior and explicit choices, users model disallowed behavior. This makes it easier to model loosely structured processes. Without appropriate precautions, however, users are less supported in choosing which actions lead to the desired endresult. The goal of Declare is to ensure flexibility when m...
متن کاملThe Rutgers Workflow Management System: Migrating a Digital Object Management Utility to Open Source
This paper examines the development, architecture, and future plans for the Workflow Management System, a digital object management utility developed by Rutgers University Libraries (RUL) to create and catalog digital objects for repository ingest and access. The Workflow Management System (WMS) was created to solve two particular problems: a front-end utility for the Fedora open source reposit...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2017
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btx306